4TH YEAR STUDIES IN COMPUTER SCIENCE


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Dulnuwan Wimalatissa
wimald01@student.uwa.edu.au

Entry year: 2008
Enrolment status: checked and confirmed
Degree: BE(SE)
Degree status: continuing

Project: Layout Algorithms for Modelling Biological Pathways in a Navigable 3 Dimensional Space
Supervisor(s): Amitava Datta
Project status: complete semester 2, 2008


A Biological Pathway is defined as any number of chemical reactions or other events like gene expressions which result in a transformation or metabolic activity. The reactions or events, which make up a biological pathway, occur at the molecular level of living cells. Biological pathways are used as a way to model the complex nature of molecular interaction; specifically the way biological functions are accomplished, or how the molecules respond to environmental stimuli. This project ultimately aims to investigate and develop different algorithms to layout biological pathways in a 3 dimensional space, such that the problems faced by current implementations of pathway rendering software are resolved. Due to the complexity of biological pathways, tools which allow a reduction in this level of this complexity are extremely helpful. Current tools while effective in certain situations need to be improved to allow greater flexibility and useability. I expect this project will help achieve this goal.

Proposal
Dissertation
Last update: Wed Feb 25 13:20:04 2009
For further enquiries, please contact the 4th Year Coordinator, Luigi Barone.

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School of Computer Science & Software Engineering
The University of Western Australia
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Last modified: Thu Aug 20 13:23:54 2009